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Periodic Table/Compounds/Histidine

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© Melvin Olsson 2025–2026
Data: IAEA & PubChem

Histidine

C₆H₉N₃O₂·155.157 g/mol·Amino Acids·CID 773
Amino AcidEssential

The only amino acid whose imidazole side chain has a pKa (~6.0) near physiological pH, allowing it to act as both proton donor and acceptor. Essential for infants. Found in enzyme active sites where proton transfer is needed. Precursor to histamine.

IUPAC: 2-amino-3-(1H-imidazol-5-yl)propanoic acid

Also known as: 4998-57-6, 2-amino-3-(1H-imidazol-5-yl)propanoic acid, Histidine, DL-, QU6SDF3Q03, DL-2-Amino-3-(4-imidazolyl)propionsaeure (+14 more)

2D structure of Histidine

Molecular Structure

Molecular Propertiesmass · H-bonds · stereo

Molecular Weight

155.150g/mol

Exact Mass

155.069477Da

Monoisotopic Mass

155.069477Da

XLogP

-3.2

Polar Surface Area

92.0Ų

Complexity

151

Formal Charge

0

H-Bond Donors

3

H-Bond Acceptors

4

Rotatable Bonds

3

Heavy Atoms

11

Stereo Centers

0

Bond Stereo

0

Drug-Likeness (Lipinski's Rule of Five)

✓ 155.2 g/mol
MW ≤ 500
✓ -3.2
LogP ≤ 5
✓ 3
H-bond donors ≤ 5
✓ 4
H-bond acceptors ≤ 10

Passes all rules — good oral bioavailability predicted

Chemical IdentifiersSMILES · InChI

InChI

InChI=1S/C6H9N3O2/c7-5(6(10)11)1-4-2-8-3-9-4/h2-3,5H,1,7H2,(H,8,9)(H,10,11)

Constituent Elements

C
CarbonZ=6
H
HydrogenZ=1
N
NitrogenZ=7
O
OxygenZ=8

Isomers8 compounds with formula C₆H₉N₃O₂

2D structure of (2S)-2-amino-3-(1H-imidazol-5-yl)propanoic acid

(2S)-2-amino-3-(1H-imidazol-5-yl)propanoic acid

CID 6274 · 155.2 g/mol

2D structure of (2S)-2-azaniumyl-3-(1H-imidazol-5-yl)propanoate

(2S)-2-azaniumyl-3-(1H-imidazol-5-yl)propanoate

CID 6971009 · 155.2 g/mol

2D structure of (2R)-2-amino-3-(1H-imidazol-5-yl)propanoic acid

(2R)-2-amino-3-(1H-imidazol-5-yl)propanoic acid

CID 71083 · 155.2 g/mol

2D structure of 4,6-dimethoxypyrimidin-2-amine

4,6-dimethoxypyrimidin-2-amine

CID 118946 · 155.2 g/mol

2D structure of azanium N-oxido-N-phenylnitrous amide

azanium N-oxido-N-phenylnitrous amide

CID 2724103 · 155.2 g/mol

2D structure of ethyl 5-amino-1H-pyrazole-4-carboxylate

ethyl 5-amino-1H-pyrazole-4-carboxylate

CID 81472 · 155.2 g/mol

2D structure of 6-amino-1,3-dimethylpyrimidine-2,4-dione

6-amino-1,3-dimethylpyrimidine-2,4-dione

CID 81152 · 155.2 g/mol

2D structure of 2,6-dimethoxypyrimidin-4-amine

2,6-dimethoxypyrimidin-4-amine

CID 76789 · 155.2 g/mol

External Resources

PubChem ↗Wikipedia ↗